Migrating Workflows to AWS HealthOmics

AWS HealthOmics accelerates research & personalized medicine by simplifying, scaling, and securing genomic data storage, analysis, and collaboration

During BioIT 2024, Deven Atnoor, VP of Scientific Strategy at Clovertex, delivered a presentation about how healthcare and life sciences organizations can utilize AWS HealthOmics to improve scientific workflows. He highlighted two key demonstrations focusing on workflow migration and optimization, providing valuable insights into the practical applications of this AWS service.

Why AWS HealthOmics?

AWS HealthOmics is a purpose-built service designed to help healthcare and life science organizations, along with their software partners, store, query, and analyze genomic, transcriptomic, and other omics data, leading to valuable insights that improve health outcomes.

With HealthOmics, users can securely run analyses using scalable storage that adjusts to demand and a pay-as-you-go pricing model that eliminates upfront costs and optimizes expenses. Additionally, HealthOmics offers a collaborative environment for sharing data, analyses, and insights with other researchers.

Accelerate R&D

  • Efficient analysis of genomic and biological data

  • Identify better targets and develop effective drugs

  • Accelerating drug discovery and development.

Improve Outcomes

  • Analyze biological and genomic data with precision

  • Develop precision medicine approaches tailored to individuals

  • Accelerate Population Health use cases

Generate Insights

  • Reproducibility of data and workflows

  • Metadata management and creation of insights

  • Scientists can focus on their science, not worry about infrastructure.

Enable Collaboration

  • Facilitate collaboration among researchers and healthcare organizations

  • Centralized platform for data storage and analysis

  • Ability to Share data and workflows across accounts

Key Takeaways in This Presentation

Learn more about the versatility of HealthOmics and how Clovertex works in collaboration with AWS to support the acceleration of drug discovery, including:

Workflow Migration Demonstrations

  • Demo 1 – Migration of an AI/ML workflow using Nextflow

  • Demo 2 – Migration of custom workflow from Oxford Nanopore technologies

Migration Process

  • The importance of process for migrating workflows

  • The ease of infrastructure management with HealthOmics

  • Workflow modification and troubleshooting

Benefits

  • Improved time spent, cost, and infrastructure scalability

  • Streamlined interface for workflow management

  • Better parameter control for improved execution and efficiency

Lessons Learned

  • How to build production-ready workflows for scalable analysis

  • Why task-level performance analysis is crucial for a seamless workflow migration

  • How standard outputs and reports can be automatically generated for genomic workflows

Drive Breakthroughs in Drug Discovery

AWS HealthOmics empowers healthcare and life science organizations to build at-scale solutions for storing, querying, and analyzing genomic, transcriptomic, and other omics data. By eliminating the undifferentiated heavy lifting, HealthOmics enables organizations to generate deeper insights, improve health outcomes, and advance scientific discoveries.

For more information on how Clovertex can help your organization accelerate drug discovery using AWS HealthOmics, contact us today.

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